{"id":29,"date":"2024-02-24T21:29:56","date_gmt":"2024-02-24T21:29:56","guid":{"rendered":"http:\/\/localhost:8888\/tiwarilab\/?page_id=29"},"modified":"2024-05-23T20:17:59","modified_gmt":"2024-05-23T20:17:59","slug":"publications","status":"publish","type":"page","link":"https:\/\/chem.sites.mtu.edu\/tiwari\/publications\/","title":{"rendered":"Publications"},"content":{"rendered":"\t\t
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WELCOME TO TIWARI RESEARCH GROUP<\/h6>\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t
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Publications<\/h1>\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t
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Students\/postdoc<\/p>\t\t\t\t<\/div>\n\t\t\t\t<\/div>\n\t\t\t\t

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Adhikari R<\/u>,\u00a0Yang M<\/u>, Saikia N,\u00a0Dutta C<\/u>, Alharbi WFA, Shan Z, Pandey R, and\u00a0Tiwari A<\/strong>.\u00a0Acetylation of A\u03b242 at Lysine 16 Disrupts Amyloid Formation.<\/a>\u00a0\u00a0ACS Chem Neurosci.<\/em><\/strong>\u00a0(2020)<\/strong>\u00a011<\/strong>(8):1178-1191.\u00a0DOI:<\/strong>\u00a010.1021\/acschemneuro.0c00069. PMID: 32207962<\/p>

Mazi W,\u00a0Adhikari R<\/u>, Zhang Y, Xia S, Fang M, Luck RL, Tajiri M,\u00a0Tiwari A<\/b>, Tanasova M, and Liu H.\u00a0<\/b>Fluorescent Probes with High pKa Values Based on Traditional, Near-infrared Rhodamine, and Hemicyanine Fluorophores for Sensitive Detection of Lysosomal pH Variations.<\/a>\u00a0Methods<\/i>\u00a0(2019) 168:\u00a0<\/b>40-50. DOI:\u00a0https:\/\/doi.org\/10.1016\/j.ymeth.2019.07.012<\/a><\/p>

Chen T-H, Zhang S, Jaishi M,\u00a0Adhikari R<\/u><\/em>, Bi J, Fang M, Xia S, Zhang Y, Luck RL, Pati R, Lee H-M, Luo F-T,\u00a0Tiwari A<\/strong>, and Liu H.\u00a0\u00a0<\/strong>New Near-Infrared Fluorescent Probes with Single-Photon Anti-Stokes-Shift Fluorescence for Sensitive Determination of pH Variances in Lysosomes with a Double-Checked Capability<\/a>.\u00a0ACS Appl. Bio Mater.\u00a0<\/em>(2018) 1<\/strong>(3): 549-560.<\/strong><\/p>

Fang M,\u00a0Adhikari R<\/u><\/em>, Bi J, Mazi W,\u00a0Dorh N<\/u><\/em>, Wang J, Conner N, Ainsley J, Karbencheva-Christova TG, Luo F-T,\u00a0Tiwari A<\/strong>, and Liu H.\u00a0Fluorescent probes for sensitive and selective detection of pH changes in live cells in visible and near-infrared channels<\/a>.\u00a0J Mater. Chem. B<\/em>\u00a0(2017) 5<\/strong>(48):\u00a0<\/strong>9579-9590.<\/p>

Zhang J, Li C,\u00a0Dutta C<\/u><\/em>, Fang M, Zhang S,\u00a0Tiwari A<\/strong>, Werner T, Luo F-T, Liu H.\u00a0A novel near-infrared fluorescent probe for sensitive detection of\u00a0\u03b2<\/em>-galactosidase in living cells<\/a>.\u00a0Analytica Chimica Acta<\/em><\/strong>\u00a0(2017) 968:\u00a0<\/strong>97-104.<\/p>

Zhang S,\u00a0Adhikari R<\/u><\/em>, Fang M,\u00a0Dorh N<\/u><\/em>, Li C, Jaishi M, Zhang J,\u00a0Tiwari A,\u00a0<\/strong>Pati R, Luo F-T, and Liu H. \u00a0Near-Infrared Fluorescent Probes with Large Stokes Shifts for Sensing Zn(II) Ions in Living Cells.<\/a>\u00a0ACS Sensors<\/em>\u00a0(2016) 1<\/strong>(12):\u00a0<\/strong>1408-1415.<\/p>

Zhang J,\u00a0Yang M<\/em><\/span>, Mazi W, Adhikari K, Fang M, Xie F, Valenzano L,\u00a0Tiwari A<\/b>, Fen-Tair L, and Liu H.\u00a0Unusual fluorescent responses of Morpholine-functionalized fluorescent probes to pH via manipulation of BODIPY\u2019s HOMO and LUMO energy orbitals for intracellular pH detection.\u00a0<\/a>ACS Sens.\u00a0<\/b><\/i>(2016) 1<\/b>(2): 158-165.<\/p>

Dorh N<\/em><\/span>, Zhu S, Dhungana KB, Pati R, Fen-Tair L, Liu H, and\u00a0Tiwari A<\/b>.\u00a0BODIPY-based fluorescent probes for sensing protein surface-hydrophobicity.\u00a0<\/a>Sci Rep.\u00a0<\/b><\/i>(2015) 5<\/b>:18337. DOI:10.1038\/srep18337<\/p>

Dutta C<\/em><\/span>,\u00a0Yang M<\/em><\/span>, Long F, Shahbazian-Yassar R, and\u00a0Tiwari A<\/b>.Preformed seeds modulate native insulin aggregation kinetics .\u00a0<\/a>J Phys. Chem. B\u00a0<\/b><\/i>(2015) 119\u00a0<\/b>(49): 15089-15099.<\/p>

Yang M<\/em><\/span>,\u00a0Dutta C<\/em><\/span>, and\u00a0Tiwari A<\/b>.\u00a0Disulfide-bond scrambling promotes amorphous aggregates in lysozyme and bovine serum albumin.\u00a0<\/a>J Phys. Chem. B\u00a0<\/b><\/i>(2015) 119\u00a0<\/b>(10): 3969-3981.<\/p>

Zhang J,\u00a0Yang M<\/em><\/span>, Li C,\u00a0Dorh N<\/em><\/span>, Xie F, Luo FT,\u00a0Tiwari A<\/b>, and Liu H.Near-infrared fluorescent probes based on piperazine-functionalized BODIPY dyes for sensitive detection of lysosomal pH.\u00a0<\/a>J Mater. Chem. B\u00a0<\/b><\/i>(2014) 3\u00a0<\/b>(10): 2173-2184.<\/p>

ZhaoY, Xing Q,\u00a0Janjanam J<\/em><\/span>, He K, Long F, Low K.-B,\u00a0Tiwari A<\/b>, Zhao F, Shahbazian-Yassar R, Friedrich C, Shokuhfar T.\u00a0Facile electrochemical synthesis of antimicrobial TiO2<\/sub>\u00a0nanotube arrays.<\/a>International Journal of Nanomedicine.\u00a0<\/b><\/i>(2014) 9\u00a0<\/b>(1): 5177-5187.<\/p>

Vegesna G,\u00a0Janjanam J<\/em>,<\/span> Bi J, Luo F-T, Zhang J, Olds C,\u00a0Tiwari A<\/b>, and Liu H.\u00a0pH-activatable near-infrared fluorescent probes for detection of lysosomal pH inside living cells.\u00a0<\/a>J Mater. Chem. B\u00a0<\/b><\/i>(2014) 2:\u00a0<\/b>4500-4508.<\/p>

Ding X,\u00a0Janjanam J<\/em><\/span>,\u00a0Tiwari A<\/b>, Thompson M, and Heiden PA.\u00a0Peptide-directed self-assembly of functionalized polymeric nanoparticles Part I: Design and self-assembly of peptide-copolymer conjugates into nanoparticle fibers and 3D scaffolds.\u00a0<\/a>Macromol. Biosci.\u00a0<\/b><\/i>(2014) 14<\/b>(6): 853-871.<\/p>

Low HP,\u00a0Tiwari A<\/b>,\u00a0Janjanam J<\/em><\/span>, Qiu L, Chang C-I, Strohsnitter WC, Norwitz ER, Tam SW, Evans JE, Green KM, Paulo JA, Lambe M, and Hsieh CC.\u00a0Screening preeclamptic cord plasma for proteins associated with decreased breast cancer susceptibility.\u00a0<\/a>Genomics Proteomics Bioinformatics\u00a0<\/b><\/i>(2013) 11<\/b>(6): 335-344.<\/p>

Morfini GA, Bosco DA, Brown H, Gatto R, Kaminska A, Song Y, Molla L, Baker L, Marangoni MN, Berth S, Tavassoli E, Bagnato C,Tiwari A<\/b>, Hayward LJ, Pigino GF, Watterson DM, Huang C-F, Banker G, Brown Jr. RH, and Brady ST.\u00a0Inhibition of fast axonal transport by pathogenic SOD1 involves activation of p38 MAP kinase.\u00a0<\/a>PLoS ONE<\/b><\/i>(2013) 8<\/b>(6): e65235.<\/p>

Zhu S, Zhang J,\u00a0Janjanam J<\/span><\/em>, Vegesna G, Luo F-T,\u00a0Tiwari A<\/b>, and Liu H.\u00a0Highly Water-soluble BODIPY-based fluorescent probes for sensitive fluorescent sensing of zinc(II).\u00a0<\/a>J Mater.Chem. B\u00a0<\/b><\/i>(2013) 1<\/b>\u00a0: 1722-1728.<\/p>

Chen N, Xiang Xu,\u00a0Tiwari A<\/b>, and Heiden PA.\u00a0Tuning Thermoresponsive Behavior of Diblock Copolymers And Their Gold Core Hybrids. Part 1. Importance of Placement of Amphiphilic End Groups on the Diblock Copolymers\u00a0<\/a>J Colloid Interface Sci\u00a0<\/b><\/i>(2013) 391\u00a0<\/b>: 60-69.<\/p>

Zhu S, Zhang J,\u00a0Janjanam J<\/em><\/span>, Bi J, Vegesna G,\u00a0Tiwari A<\/b>, Luo Fen-Tair, Wei J and Liu H.\u00a0Highly Water-soluble, near-infrared emissive BODIPY polymeric dye bearing RDG peptide residues for cancer imaging.\u00a0<\/a>Analytica Chimica Acta\u00a0<\/b><\/i>(2013) 758<\/b>\u00a0: 138-144.<\/p>

Zhu S,\u00a0Dorh N<\/em><\/span>, Zhang J, Vegesna G, Li H, Luo F-T,\u00a0Tiwari A<\/b>, and Liu H.\u00a0Highly Water-soluble Neutral Near-infrared Emissive BODIPY Polymeric Dyes.\u00a0<\/a>Journal of Materials Chemistry\u00a0<\/b><\/i>(2012) 22<\/b>: 2781-2790.<\/p>

Zhu S, Zhang J, Vegesna G,\u00a0Tiwari A<\/b>, Luo F-T, Zeller M, Luck R, Li H, Green SA, and Liu H.\u00a0Controlled Knoevenagel reactions of methyl groups of 1,3,5,7-tetramethyl BODIPY dyes for unique BODIPY dyes.<\/a>RSC Advances\u00a0<\/b><\/i>(2012) 2<\/b>: 404-407.<\/p>

Molnar KS, Karabacak NM, Johnson JL, Wang Q,\u00a0Tiwari A<\/b>, Hayward LJ, Coales SJ, Hamuro Y, and Agar JN.\u00a0A common property of amyotrophic lateral sclerosis-associated variants: Destabilization of the Cu\/Zn superoxide dismutase electrostatic loop.<\/a>\u00a0J Biol Chem.\u00a0<\/b><\/i>(2009) 284<\/b>(45): 30965-30973.<\/p>

Tiwari A<\/b>, Liba A, Sohn SH, Seetharaman SV, Bilsel O, Matthews CR, Hart PJ, Valentine JS, and Hayward LJ.\u00a0Metal deficiency increases aberrant hydrophobicity of mutant superoxide dismutases that cause amyotrophic lateral sclerosis.\u00a0<\/a>J Biol Chem.\u00a0<\/b><\/i>(2009) 284<\/b>(40): 27746-27758.<\/p>

Karabacak NM, Li L,\u00a0Tiwari A<\/b>, Hayward LJ, Hong P, Easterling ML, and Agar JN.\u00a0Sensitive and specific identification of wild-type and variant proteins from 8 to 669 kDa using top-down mass spectrometry.<\/a>Mol Cell Proteomics.\u00a0<\/b><\/i>(2009) 8<\/b>(4): 846-856.<\/p>

Morfini GA, Burns M, Binder LI, Kanaan NM, Lapointe N, Bosco DA, Brown RH Jr, Brown H,\u00a0Tiwari A<\/b>, Hayward L, Edgar J, Nave KA, Garberrn J, Atagi Y, Song Y, Pigino G, and Brady ST.\u00a0Axonal Transport Defects in Neurodegenerative Diseases.\u00a0<\/a>J Neurosci.\u00a0<\/b><\/i>(2009) 29<\/b>(41): 12776-12786. [REVIEW]<\/p>

Cao X, Antonyuk S, Seetharaman SV, Whitson LJ, Taylor AB, Holloway SP, Strange RW, Doucette PA, Valentine JS,\u00a0Tiwari A<\/b>, Hayward LJ, Padua S, Cohlberg JA, Hasnain SS, and Hart PJ.Structures of the G85R variant of SOD1 in familial ALS.\u00a0<\/a>J Biol Chem.<\/b><\/i>(2008) 283<\/b>(23): 16169-16177.<\/p>

Shaw BF, Lelie HL, Durazo A, Nersissian AM, Xu G, Chan PK, Gralla EB,\u00a0Tiwari A<\/b>, Hayward LJ, Borchelt DR, Valentine JS, and Whitelegge JP.\u00a0Detergent-insoluble aggregates associated with amyotrophic lateral sclerosis in transgenic mice contain primarily full-length, unmodified superoxides dismutase-1.\u00a0<\/a>J Biol Chem.<\/b><\/i>\u00a0(2008) 283<\/b>(13): 8340-8350.<\/p>

Watanabe S, Nagano S, Duce J, Kiaei M, Li Q-X, Tucker SM,\u00a0Tiwari A<\/b>, Brown RH, Jr., Beal MF, Hayward LJ, Culotta VC, Yoshihara S, Sakoda S, and Bush AI.\u00a0Increased affinity for copper mediated by cysteine 111 in forms of mutant superoxide dismutase 1 linked to amyotrophic lateral sclerosis.\u00a0<\/a>Free Radic Biol Med.\u00a0<\/b><\/i>(2007) 42<\/b>(10): 1534-1542.<\/p>

Tiwari A<\/b>\u00a0and Bhat R.\u00a0Stabilization of yeast hexokinase A by polyol osmolytes: Correlation with physicochemical properties of aqueous solutions.\u00a0<\/a>Biophys Chem.\u00a0<\/b><\/i>(2006) 124<\/b>(2): 90-99.<\/p>

Tiwari A<\/b>\u00a0and Hayward LJ.\u00a0Mutant SOD1 instability: Implications for toxicity in Amyotrophic Lateral Sclerosis.<\/a>\u00a0Neurodegener Dis.<\/b><\/i>\u00a0(2005) 2<\/b>(3-4): 115-127. [REVIEW]<\/p>

Tiwari A<\/b>, Xu Z, and Hayward LJ.\u00a0Aberrantly increased hydrophobicity shared by mutants of Cu\/Zn superoxide dismutase in familial amyotrophic lateral sclerosis.\u00a0<\/a>J Biol Chem.<\/b><\/i>\u00a0(2005) 280<\/b>(33): 29771-29779.
(Featured in August 19, 2005 issue of the Journal of Biological Chemistry as\u00a0\u201cPaper of the Week\u201d<\/b>\u00a0<\/a>(J Biol Chem. (2005) 280: e99939)).<\/p>

Rodriguez JA, Shaw BF, Durazo A, Sohn SH, Doucette PA, Nerissian AM, Faull KF, Eggers DK,\u00a0Tiwari A<\/b>, Hayward LJ, and Valentine JS.Destabilization of apoprotein is insufficient to explain Cu, Zn-superoxide dismutase-linked ALS pathogenesis.\u00a0<\/a>Proc Natl Acad Sci USA.\u00a0<\/b><\/i>(2005) 102<\/b>(30): 10516-10521.<\/p>

Tummala H, Jung C,\u00a0Tiwari A<\/b>, Higgins C, Trang E, Hayward LJ and Xu Z.\u00a0Inhibition of chaperone activity is a shared property of several Cu, Zn superoxide dismutase mutants that cause amyotrophic lateral sclerosis.\u00a0<\/a>J Biol Chem.<\/b><\/i>\u00a0(2005) 280<\/b>(18): 17725-17731.<\/p>

Chacko B, Qin BY,\u00a0Tiwari A<\/b>, Shi G, Lam S, Hayward LJ, deCaestecker M, and Lin K.\u00a0Structural Basis of Heteromeric Smad Protein Assembly in TGF-b Signaling.\u00a0<\/a>Mol Cell.<\/b><\/i>\u00a0(2004) 15<\/b>(5): 813-823.<\/p>

Kumar DP,\u00a0Tiwari A<\/b>, and Bhat R.\u00a0Effect of pH on the stability and structure of yeast hexokinase A: Acidic amino acid residues in the cleft region are critical for the opening and the closing of the structure.\u00a0<\/a>J Biol Chem.<\/b><\/i>\u00a0(2004) 279<\/b>(31): 32093-32099.<\/p>

Tiwari A<\/b>\u00a0and Hayward LJ.\u00a0Familial ALS Mutants of Cu\/Zn Superoxide Dismutase are Susceptible to Disulfide Reduction.\u00a0<\/a>J Biol Chem.<\/b><\/i>\u00a0(2003) 278<\/b>(8): 5984-5992.<\/p>

Rodriguez J, Valentine JS, Eggers DK, Roe JA,\u00a0Tiwari A<\/b>, Brown RH Jr, and Hayward LJ.\u00a0Familial ALS-associated mutations decrease the thermal stability of distinctly metallated species of human copper zinc superoxide dismutase.\u00a0<\/a>J Biol Chem.<\/b><\/i>\u00a0(2002) 277<\/b>(18): 15932-15937.<\/p>

Hayward LJ, Rodriguez JA, Kim JW,\u00a0Tiwari A<\/b>, Goto JJ, Cabelli DE, Valentine JS, Brown RH Jr.\u00a0Decreased metallation and activity in subsets of mutant superoxide dismutases associated with familial ALS.<\/a>J Biol Chem.<\/b><\/i>\u00a0(2002) 277<\/b>(18): 15923-15931.<\/p>

Gupta P, Singh S,\u00a0Tiwari A<\/b>, Bhat R, and Bhatnagar R.\u00a0Effect of pH on stability of anthrax lethal factor: correlation between denaturation and activity.\u00a0<\/a>Biochem Biophys Res Commun.<\/b><\/i>\u00a0(2001) 284<\/b>(3): 568-573.<\/p>

Tiwari A<\/b>, Kumar DP, and Bhat R.\u00a0An efficient and cost-effective procedure for preparing samples for differential scanning calorimetry experiments.\u00a0<\/a>Anal Biochem.<\/b><\/i>\u00a0(2000) 284<\/b>(2): 406-408.<\/p><\/div><\/article><\/div>